bang hmm hidden markov model
NHẬN DẠNG THỰC THỂ TRONG SINH HỌC BẰNG HMM (Hidden Markov Model )
Ngày tải lên :
14/08/2015, 22:17
... thuyết HMM (Hidden Markov Model) Mô hình Markov ẩn giới thiệu nghiên cứu vào cuối năm 1960 đầu năm 1970 ,cho đến ứng dụng nhiều nhận dạng tiếng nói, tin sinh học xử lý ngôn ngữ tự nhiên HMM mô ... Chikashi Nobata and Jun-ichi Tsujii Extracting the Names of Genes and Gene Products with a Hidden markov Model Department of Infomation Science Graduate School of Science University of Tokyo, Hongo-7-3-1 ... GuoDong Zhou, Jian Su Named Entity Recognition using an HMM- based Chunk Tagger [13].Website: http://vi.wikipedia.org/wiki/M%C3%B4_h%C3%ACnh _Markov_ %E1%BA%A9n Thank you ! ...
- 17
- 582
- 0
Tài liệu Báo cáo khoa học: "A Pronoun Anaphora Resolution System based on Factorial Hidden Markov Models" docx
Ngày tải lên :
20/02/2014, 04:20
... FHMM-based pronoun resolution system Model Description This work is based on a graphical model framework called Factorial Hidden Markov Models (FHMMs) Unlike the more commonly known Hidden Markov ... complex hidden states to be learned with limited training data 2.1 Factorial Hidden Markov Model Factorial Hidden Markov Models are an extension of HMMs (Ghahramani and Jordan, 1997) HMMs represent ... (3) For a simple HMM, the hidden state corresponding to each observation state only involves one variable An FHMM contains more than one hidden variable in the hidden state These hidden substates...
- 10
- 430
- 0
Báo cáo khoa học: "Lexically-Triggered Hidden Markov Models for Clinical Document Coding" pot
Ngày tải lên :
07/03/2014, 22:20
... 4.3 4.3 Model We model this sequence data using a discriminative SVM -HMM (Taskar et al., 2003; Altun et al., 2003) This allows us to use rich, over-lapping features of the input while also modeling ... lexically-triggered HMM (LT -HMM) , is based on the fact that a code assignment is often indicated by short lexical triggers in the text Consequently, a two-stage coding method is proposed First, the LT -HMM identifies ... Information Management, CAC Proceedings, Fall M Collins 2002 Discriminative training methods for Hidden Markov Models: Theory and experiments with perceptron algorithms In EMNLP K Crammer, M Dredze, K...
- 10
- 397
- 0
Báo cáo khoa học: "Hierarchical Reinforcement Learning and Hidden Markov Models for Task-Oriented Natural Language Generation" ppt
Ngày tải lên :
07/03/2014, 22:20
... learn a hierarchy of generation policies 656 3.2 Hidden Markov Models for NLG The idea of representing the generation space of a surface realiser as an HMM can be roughly defined as the converse of ... generation-space models Natural Language Engineering, 1:1–26 Heriberto Cuay´ huitl, Steve Renals, Oliver Lemon, and a Hiroshi Shimodaira 2005 Human-Computer Dialogue Simulation Using Hidden Markov Models ... is informed by an HMM- based generation space reward function The greedy policy is informed only by the HMM and always chooses the most An example for the state variables of model M1 are the annotation...
- 6
- 435
- 0
Báo cáo khoa học: "Techniques to incorporate the benefits of a Hierarchy in a modified hidden Markov model" pptx
Ngày tải lên :
08/03/2014, 02:21
... fundamental problems of HMM construction (Rabiner and Hierarchical Hidden Markov Model A HHMM is a structured multi-level stochastic process, and can be visualised as a tree structured HMM (see Figure ... preliminary evidence that the merged hierarchical hidden Markov Model (MHHMM) is able to produce more accurate results either a plain HHMM or a HMM during the text chunking task The results suggest ... Introduction to Hidden Markov Models IEEE Acoustics Speech and Signal Processing ASSP Magazine, ASSP-3(1): 4–16, January M Skounakis, M Craven and S Ray 2003 Hierarchical Hidden Markov Models for...
- 8
- 528
- 0
Hidden markov models
Ngày tải lên :
14/03/2014, 23:47
... What is Covered • Observable Markov Model • Hidden Markov Model • Evaluation problem • Decoding Problem Markov Models • Set of states: {s1 , s2 , , s N } • Process ... not on neighbouring observation frames Example of Hidden Markov Model 0.3 0.7 Low High 0.2 0.6 Rain 0.4 0.8 0.4 0.6 Dry Example of Hidden Markov Model • Two states : ‘Low’ and ‘High’ atmospheric ... issues using HMMs : Evaluation problem Given the HMM M=(A, B, π) and the O=o1 o2 oK , calculate the probability that model M has generated sequence O • Decoding problem Given the HMM M=(A, B,...
- 28
- 1.4K
- 1
Báo cáo khoa học: Prediction of coenzyme specificity in dehydrogenases ⁄ reductases A hidden Markov model-based method and its application on complete genomes doc
Ngày tải lên :
23/03/2014, 10:21
... discussion We have developed a method for prediction of coenzyme specificity, based upon hidden Markov models (HMMs) and sequence motifs (see Experimental proce1178 Fig Number of coenzyme binding ... terms of specificity and selectivity All HMMs were developed using the hmmbuild command in HMMer [17], with the parameters –F and –fast, followed by the hmmcalibrate command The ASTRAL database ... proteins from 107 genomes Proteins 60, 606–616 17 Eddy SR (1998) Profile hidden Markov models Bioinformatics 14, 755–763 (http://hmmer.wustl.edu ) 18 Chandonia JM, Hon G, Walker NS, Lo Conte L, Koehl...
- 8
- 481
- 0
Báo cáo khoa học: Classification of the short-chain dehydrogenase ⁄reductase superfamily using hidden Markov models potx
Ngày tải lên :
29/03/2014, 09:20
... overview and allow for annotations and for functional conclusions In this article, we apply hidden Markov models (HMMs) to obtain a sequence-based subdivision of the SDR superfamily that allows for automatic ... general HMMs might not correctly identify sequence fragments, which more specialized HMMs can About 1600 SDRs were identified in this way, i.e not found by the general SDR HMMs but by the family HMMs ... Experimental procedures A number of HMMs were developed in order to arrive at a subclassification of the SDR superfamily There are already HMMs (three Pfam HMMs and an HMM previously developed by us)...
- 12
- 379
- 0
Báo cáo khoa học: "Unsupervised Topic Identification by Integrating Linguistic and Visual Information Based on Hidden Markov Models" potx
Ngày tải lên :
31/03/2014, 01:20
... preparation sauteing dishing up Figure 1: Topic identification with Hidden Markov Models word distribution can be learned from raw texts, their model cannot utilize discourse features, such as cue phrases ... Identification based on HMMs We employ HMMs for topic identification, where a hidden state corresponds to a topic and various features described in Section are observed In our model, considering the ... Duong, Hung H.Bui, and S.Venkatesh 2005 Topic transition detection using hierarchical hidden markov and semi -markov models In Proceedings of ACM International Conference on Multimedia(ACM-MM05), pages...
- 8
- 354
- 0
Báo cáo khoa học: "Finite State Transducers Approximating Hidden Markov Models" doc
Ngày tải lên :
31/03/2014, 21:20
... model an nl-type model, the resulting FST an nl-type transducer and the algorithm leading from the HMM to this transducer, an nl-type approximation of a 1st order HMM Adapted to a 2nd order HMM, ... with the underlying HMM The FSTs perform tagging faster than the HMMs Since all transducers are approximations of HMMs, they give a lower tagging accuracy than the corresponding HMMs However, improvement ... subsequences known to the principal incomplete s-type model, exactly as the underlying HMM does, and all other subsequences as the auxiliary n-type model does First, the word is looked for in the lexicon...
- 8
- 239
- 0
face detection and recognition using hidden markov models
Ngày tải lên :
24/04/2014, 12:35
... ữ ỏ ảÂ CffqmfãfqĐmề 400 200 1000 Initialized HMM 300 200 200 100 200 400 100 600 YES Convergence NO Ô Â ƠÊĂ 2500 10 2000 1000 Estimated HMM 10 1000 10 Segmental K Means YES 800 0 500 200 ... Baum-Welch 500 Initialize Parameters Algorithm Forward Backward Uniform Segmentation Prototype HMM Initialized HMM Ă Ơ Â Ơ Ơơ Ô ả Â Ă Â Ô quàR%ôàuFĐHƯ9 xê0xfFHfq qêẫpRÂqãHàCqqf}êfC0rĐ%ạuf ... Maximum Extraction Selection Recognized Ơ Â Ơ U Ơ Ô ề ữ õ Â qĐàHàRTq%ảhề Block Viterbi Model Probability Computation Extraction Not Frontal Face Feature Extraction Probability Computation...
- 5
- 345
- 0
hand gesture recognition using input-output hidden markov models
Ngày tải lên :
24/04/2014, 12:54
... Architecture and modeling Hand Gesture Recognition Numerous method for hand gesture recognition have been proposed: neural networks (NN), such as recurrent models [8], hidden markov models (HMM) [10] ... recognition method based on In– put/Output Hidden Markov Models is presented IOHMM deal with the dynamic aspects of gestures They have Hid– den Markov Models properties and Neural Networks dis– ... y1 p , with p = : : :P The IOHMM model is described as follows: xt : state of the model at time t where xt X , X : : :n and n is the number of states of the model, Si : set of successor states...
- 6
- 421
- 0
on merging hidden markov models with deformable templates
Ngày tải lên :
24/04/2014, 13:14
... Conf Acoust.,Speech,Signal Processing, pp III-149 - 111-152, 1992 VI Agazzi and S Kuo, Hidden Markov model based optical character recognition in the presence of deterministic transformations,” ... full-color head and shoulders video sequence The head was modeled as an ellipse with no rotation, and the foreground and background pdf’ were modeled as s Gaussian mixtures Each mixture contained ... probability distribution functions given the partitioned data, and repeat until convergence can be modeled by an ellipse with a foreground state and a background state (Figure la) This has some intuitive...
- 4
- 267
- 0
parametric hidden markov models for gesture recognition
Ngày tải lên :
24/04/2014, 13:16
... WILSON AND BOBICK: PARAMETRIC HIDDEN MARKOV MODELS FOR GESTURE RECOGNITION PARAMETRIC HIDDEN MARKOV MODELS 3.1 Defining Parameterized Gesture Parametric HMMs explicitly model the dependence on the ... warping (DTW) and Hidden Markov models (HMMs) are two techniques based on dynamic programming Darrell and Pentland [12] applied DTW to match image template correlation scores against models to recognize ... PRIOR WORK 2.1 Using HMMs in Gesture Recognition Hidden Markov models and related techniques have been applied to gesture recognition tasks with success Typically, trained models of each gesture...
- 17
- 327
- 0
conditional random fields vs. hidden markov models in a biomedical
Ngày tải lên :
24/04/2014, 13:21
... system performance Model Baseline Model Model Model F-score 61.9 64.7 65.6 65.7 At first glance, if only the F-score values are compared, the CRF-based model outperforms the HMMbased one with a ... procedure) is compared with our three models Although all our models have improved the baseline, there is a significant difference between the first model and the other two models, which have shown rather ... performance of the HMM- based model Consequently, each entity tag of our models contains the following components: Table 3: Comparison of the influence of different sets of POS to the HMM- based system...
- 5
- 551
- 0
crane gesture recognition using pseudo 3-d hidden markov models5
Ngày tải lên :
24/04/2014, 13:44
... HMMs have been recently applied to image recognition problems with promising results [8, 9] In both publications pseudo 2-D HMMs have been utilized, which are also known as planar HMMs A P2DHMM ... one-dimensional HMMs and geometric moments as described in [3] In the experiments, four superstates with  P2DHMMs per superstate have been used as conguration of the P3DHMMs Note that the P3DHMM approach ... Summary Image sequence recognition based on novel pseudo three-dimensional Hidden Markov Models has been presented The modeling technique allows the integration of spatial and temporal derived...
- 5
- 252
- 0
thesis-a hidden markov model based approach for face detection and recognition
Ngày tải lên :
24/04/2014, 14:09
... Tracking Best Face Selection Foregroround Regions Video Sequence Background Segmentation Background Model Background Adaptation ệ ẵ ầ ệ éé ì ìì ééí ì éể ỉ ểề ể ềé ềỉ ỉể ỉ ỉỉ ề ểéểệ ẹ ểệẹ ì ễễệểĩ ẹ ... ìỉ ề é ì é ỉểề ỉ ề ỉ ệ ỉ ễ ểễé ì ỉ ểề ểệệ ìễểề ì ỉể ệ ểệ ềỉ ệỉ ề ệ ééí ệí ééí ặ éỉ Foreground Model Foreground Region Edge Detection and Skeletonization Initial Ellipse Centroid Estimation Error...
- 143
- 359
- 0
Báo cáo hóa học: " Research Article Hidden Markov Model with Duration Side Information for Novel HMMD Derivation, with Application to Eukaryotic Gene Finding" docx
Ngày tải lên :
21/06/2014, 08:20
... “side-information”, into the HMM, as described in this paper Background 2.1 Markov Chains and Standard Hidden Markov Models A Markov chain is a sequence of random variables S1 ; S2 ; S3 ; with the Markov property ... In the Markov chain model, the states are also the observables For a hidden Markov model (HMM) , we generalize to where the states are no longer directly observable (but still 1st-order Markov) , ... “Variable duration models for speech,” in Proceedings of the Symposium on the Application of Hidden Markov models to Text and Speech, pp 143–179, 1980 [3] S Winters-Hilt, Hidden Markov model variants...
- 11
- 389
- 0
Báo cáo sinh học: " Research Article Employing Second-Order Circular Suprasegmental Hidden Markov Models to Enhance Speaker Identification Performance in Shouted Talking Environments" potx
Ngày tải lên :
21/06/2014, 16:20
... SecondOrder Hidden Markov Models (HMM2 s) [8], SecondOrder Circular Hidden Markov Models (CHMM2s) [9], Suprasegmental Hidden Markov Models (SPHMMs) [10], and gender-dependent approach using SPHMMs [11] ... Suprasegmental Hidden Markov Models Second-Order Circular Suprasegmental Hidden Markov Models (CSPHMM2s) have been formed from acoustic Second-Order Circular Hidden Markov Models (CHMM2s) CHMM2s were ... the collected database between CSPHMM2s and each of LTRSPHMM1s, LTRSPHMM2s, and CSPHMM1s tmodel 1, model tCSPHMM2s, LTRSPHMM1s tCSPHMM2s, LTRSPHMM2s tCSPHMM2s, CSPHMM1s Calculated t value Neutral...
- 10
- 365
- 0
báo cáo hóa học:" Research Article Drum Sound Detection in Polyphonic Music with Hidden Markov Models" pot
Ngày tải lên :
21/06/2014, 20:20
... associated with two models: a “sound” model and a “silence” model, and the input signal is covered with these two models for each target drum independently from the others In addition to the HMM baseline ... combinations of M target drums is modelled with a separate HMM In the latter case, each target drum has two separate models: a “sound” model and a “silence” model In both approaches the recognition ... (adapted) HMM models are combined into a larger compound model; see Figures and This is done by concatenating the state transition matrices of the individual HMMs and incorporating the intermodel...
- 9
- 392
- 0