... FEBS 2003
Mutational and computational analysis of the role of conserved
residues in the active site of a family 18 chitinase
Bjørnar Synstad
1
, Sigrid Ga
˚
seidnes
1
, Daan M. F. van Aalten
2
, ... the
glutamate that acts as the catalytic acid. The active site
grooves of these chitinases are lined with aromatic amino
acids that contribute to...
... con-
taining 20% (v/v) glycerol. Data were collected using a
CCD camera at the BL 6A station of the Photon Factory
(Tsukuba, Japan) and the BL38B2 and BL40B2 stations of
SPring-8 (Harima, Japan), at ... the Cc2atomofaThr109
and the Cc1atomofaVal136 is 3.7 A
˚
. On the other hand,
in Fe-type NHase, the side-chain of the corresponding
serine residue does not i...
... Linguistics
Subjectivity and Sentiment Analysis of Modern Standard Arabic
Muhammad Abdul-Mageed
Department of Linguistics &
School of Library & Info. Science,
Indiana University,
Bloomington, USA,
mabdulma@indiana.edu
Mona ... subjectiv-
ity in these sentences. They use POS features, lex-
ical features, and a paragraph feature and obtain an
average accuracy on subjec...
... cytoplasmic 1
c-Actin
Actin, cytoplasmic 1
Tubulin b Tubulin a
Ankyrin repeat
domain-containing protein 1 8A
Ankyrin repeat
domain-containing
protein 1 8A
Heat-shock protein b1
a- Actin-2
Unclassified
Keratin, ... 3551–3567.
88 Wakeyama H, Akiyama T, Takahashi K, Amano H,
Kadono Y, Nakamura M, Oshima Y, Itabe H,
Nakayama KI, Nakayama K et al. (2007) Negative
feedback loop in the Bim-c...
... structure
of the proteins. We assigned the binding sites of these
two AAA-proteins to their different protein regions
and elucidated the importance of ATP-binding to the
two AAA-cassettes of Pex1p and ... both AAA-peroxins
AB
DC
EF
Fig. 4. Effects of point mutation of the
WalkerA and B motifs of the AAA-cassettes
of Pex1p on the morphological appearance of...
... contained IAEDANS or IANBD bands,
indicative of covalent binding of the dyes [19].
Binding activities of Ag-NPA-1
Binding of fatty acids, retinol and DAUDA were studied
by changes in the intrinsic ... [30]). A value of 1.36 was taken for the
refractive index n [31].
MALDI-TOF analysis
MALDI-TOF analysis of the peptides obtained after tryptic
digestion of the...
... 5¢-CTTGCAGTGAGCTGAGATCATAA
CAAT
GACTCCAGCCTGGGCAACAGAG-3¢; M-D sense
primer, 5¢-TGGGAATGTGAGGCTGGGGG
TCTTCTTT
CGGAACGCTGCTTCTCAAGGG-3¢; and M-D antisense
primer, 5¢-CCCTTGAGAAGCAGCGTTCC
GAAAGA
AGACCCCCAGCCTCACATTCCCA-3¢. ... cis-elements in the
TRANSFAC 7.0 database (http://www.generegulation.
com/pub/databases.html) [28]. After scanning the
TRANSFAC 7.0 database, we found that the...
... (Stratagene) and the forward primer
5¢-GCAATCATATGAGCTGGAAGAGGAACAAGTT
CCG-3¢ and the reverse primer 5¢-GGATCCTTAGGA
GCTGAAAACCTCATCTGCG-3¢, containing NdeIand
BamHI restriction sites, respectively. The ... reduction potentials of flavin cofactors, and
also of the haems in the case of NOS and P450 BM3. In
spectroelectrochemical titrations of the isolated domains...
... domain of a taxin-2 and the deubiquitinating
Josephin domain o f ataxin-3. We also speculate about dis-
tant evolutionary relationships of ubiquitin-binding UIM,
GAT, UBA and CUE domains and helical ... amino acid 254–345) [37] and LsmAD (Lsm-
associated doma in, amino acid 353–475). The LsmAD
domain of ataxin-2 contains both a clathrin-mediated
trans-Golgi signal (YDS,...