Báo cáo khoa học: Starch-binding domains in the CBM45 family – low-affinity domains from glucan, water dikinase and a-amylase involved in plastidial starch metabolism pptx
... shows the same analysis for the hits between
the N- and C-terminal halves and vice versa within the
OPA family, the AAT family, the ST3 families and the
DAACS1 family. In case of the AAT and DAACS1
families, ... the
sequences in the database is about 60%.
Hits between the N- and C-terminal halves
Each of the sequences in the domain database was
use...
... core in this family [ 3–6 ]. To iden-
tify the catalytic residues involved in the PGDS and
PGFS activity catalyzed by AKR1B1, we introduced
site-directed mutagenesis into the tetrad, generating the
D43N, ... b-barrel, with the nicotinamide ring projecting
down into the center of the barrel and pyrophosphate
straddling the barrel lip [7]. Kubiseski et al. [8] have...
... different in comparison with those
of vertebrate trypsins, and also they are important for
inhibitor binding [8]. The phenylalanine and Ile resi-
dues in crayfish Loop37 interact with the C-terminal
segment ... (216 and
226, chymotrypsin numbering) in bovine and
all other crustacean trypsins; (B) predicted
disulfide bridges in lobster trypsins; (C)
calcium-binding site config...
... differ-
ent intensities of the R bands). To eliminate these
differences, the effects of DNA cis-platination on the
protein–DNA interactions were always normalized
with the intensity of the retarded band ... accommodate the cisplatin IACs. The
higher the probability of formation of the cisplatin
IACs within the p53DBSs due to the occurrence of
the GG, AG and ⁄ or GNG...
... containing aB-crystallin induced and not induced with IPTG.
Lane 2–5 show aB-cr ystallin uninduced at the 0, 3 and 6 h time points.
Lane 7 contains cell homogenates of aB-crystallin n ot induced. ... expression is increased in response to stress, it
protects against protein a ggregation in v itro, and it contains
the core Ôa-crystallinÕ domain found in all sHsps. In this s...
... higher
affinity binding of ferric heme.
Heme binding to proteins is commonly pH-depen-
dent [2 6–2 8] and thus heme binding in both the oxi-
dized and reduced states was investigated at higher
pH. In the oxidized ... effect on the UV-visible or EPR spectra,
clearly indicating that these residues are not directly
involved in heme binding. Furthermore, low-spin heme
binding t...
... of
three domains. The N-terminal domain is very similar in
sequence and size to IscU, the central domain is similar to a
protein carrying a [2Fe2S] cluster known as Bfd and the
C-terminal domain is ... cluster [12].
Other proteins which have been shown to be involved in
FeS cluster biosynthesis are the two chaperones HscA and
HscB. There are indications that HscA/B intera...
... Protein
Standard were obtained from Invitrogen (Osaka, Japan).
Strains and plasmids
The strains and plasmids used in this study are shown in
Table 1. The E. coli strain DH5a was used in the general
construction ... with the Coq1 protein and the pHADPS1 plasmid
that produces the HA-fused Dps1 protein were introduced
into Sc. pombe strain LA1. Crude proteins extracted...
... 2011)
doi:10.1111/j.1742-4658.2011.08043.x
Starch- binding domains are noncatalytic carbohydrate-binding modules
that mediate binding to granular starch. The starch- binding domains from
the carbohydrate-binding module family 45 (CBM45, ... 1185
Starch- binding domains in the CBM45 family – low-affinity
domains from glucan, water dikinase and...
... This indicates a
predominant in uence of the catalytic domain on
oligomerization.
Role of the C-terminal cysteine
Mutation of the cysteine located at )4 from the C-ter-
minus to a serine in the ... Aa and Ab, as well as for Ba and Bb, indicat-
ing a predominant in uence of the catalytic domains. However, addition of
a cysteine within the aromatic-rich segment of the...