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Structural basis of protein stability at poly extreme crystal structure of amya at 1 6 a resolution 3

Structural basis of protein stability at poly extreme crystal structure of amya at 1 6 a resolution  3

Structural basis of protein stability at poly extreme crystal structure of amya at 1 6 a resolution 3

... complete absence of NaCl in boiling water still retained its activity (Fig 3. 2) Figure 3. 2 Activity of AmyA after temperature melt Activity assay of AmyA at different NaCl concentration before and after ... change was detected This indicates that AmyA retains the overall fold at the entire salinity as seen in the low salt (lAmyA) and high salt (hAmyA) crystal structures 63 Figure 3. 3 The Far-UV CD ... salt and the thermal stability of AmyA, temperature melt experiments were carried out at different salt concentrations Denaturation of AmyA was monitored by circular dichroism The thermal stability...
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Structural basis of protein stability at poly extreme  crystal structure of amya at 1 6 a resolution

Structural basis of protein stability at poly extreme crystal structure of amya at 1 6 a resolution

... include batch crystallization, micro-batch crystallization and dialysis 1. 2 BASIC CONCEPTS OF CRYSTALLOGRAPHY 1. 2 .1 Crystal, unit-cell and asymmetric unit Protein crystals are usually about 40 -60 % ... In practice, data from several derivatives are combined for the refinement of heavy atom parameters and for the calculation of MIR or MIRAS phases 1. 5.5 Anomalous scattering The atomic scattering ... beams from all sets of parallel planes in the crystalline lattice (real space) The following geometrical interpretation of diffraction was formulated by Ewald 14 0 b* 13 0 12 0 N ( 010 ) 11 0 b O (13 0)...
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Structural basis of protein stability at poly extreme crystal structure of amya at 1 6 a resolution  4

Structural basis of protein stability at poly extreme crystal structure of amya at 1 6 a resolution 4

... To understand the structural features that are responsible for stability, particularly at high ionic strength, hAmyA was compared against lAmyA The hAmyA structure forms a total of 37 salt bridges ... The active site 72 of hAmyA is better superimposed with that of other known α-amylase structures than that of lAmyA In lAmyA, the main chain and side chain of the catalytic residue Asp2 24 protrude ... space group contain one monomer per asymmetric unit The overall fold of the AmyA structure in high salt (hereafter called as hAmyA) (Fig 4 .1) remains the same as that of the AmyA structure at...
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Structural basis of protein stability at poly extreme crystal structure of amya at 1 6 a resolution 2

Structural basis of protein stability at poly extreme crystal structure of amya at 1 6 a resolution 2

... entire salinity range (Fig 2 .10 ) The activity profiles of AmyA at different temperatures and pH are shown in Figs 2 .11 and 2 . 12 Figure 2 .13 AmyA activity profile Activity assay of AmyA using 20 mM ... crystallographic statistics are summarized in Table 2 .1 40 Figure 2. 5 lAmyA crystal picture Crystals of AmyA, with maximum dimensions of 0 .1 x 0 .1 x 0 .6 mm Table 2 .1 Crystal parameters and data ... temperature above 60 °C makes AmyA a true halo-thermophilic enzyme 2 .1. 4 The α-amylases: Alpha-Amylases (alpha -1, 4-glucan-4-glucanohydrolase, EC 3 .2 .1. 1) are Endo-acting enzymes that catalyze...
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Báo cáo khoa học: Crystal structures of the human SUMO-2 protein at 1.6 A and 1.2 A resolution ppt

Báo cáo khoa học: Crystal structures of the human SUMO-2 protein at 1.6 A and 1.2 A resolution ppt

... using the SUMO-2/ pET2 8a as a template The PCR was carried out for 25 cycles of 30 s at 95 °C, 30 s at 55 °C and 30 s at 72 °C, using two primers 5¢-GGAATTCCATATGGGAGTCAAGACTGAGAA CAAC-3¢ and 5¢-CCGCTCGAGTCAACCTCCCGTCT ... determine a three-dimensional structure of human SUMO at high resolution by X-ray crystallography In this paper we present the crystal structure of a truncated SUMO-2 To facilitate crystallization, ... was carried out using the triangular plate crystal form (type I) at Institute of Biological Chemistry, Academia Sinica, using an MSC MicroMax 002 X-ray generator The second data A C set of the...
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Báo cáo khoa học: Molecular basis for substrate recognition and drug ˚ resistance from 1.1 to 1.6 A resolution crystal structures of HIV-1 protease mutants with substrate analogs pptx

Báo cáo khoa học: Molecular basis for substrate recognition and drug ˚ resistance from 1.1 to 1.6 A resolution crystal structures of HIV-1 protease mutants with substrate analogs pptx

... chain and had closer contacts with the CB atom of Ala82 in PRV8 2A than observed for Val in the ˚ PR The CE atom of P3¢ Arg moved  1.2 A and formed closer interactions with the CB atom of Ala82 All ... and inactive mutant V8 2A D25N with patients [8–10] We have reported crystal structures of PR, single mutants in complex with substrate analogs CA-p2 and p2-NC, and double mutants with CA-p2 at ... compensated for the smaller side chain of Ala compared with wildtype Val However, Ala82 ⁄ 82¢ showed smaller shifts ˚ (0.1–0.4 A of Ca) with substrate analogs and larger ˚ changes (0.5–0.8 A) with...
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Báo cáo khoa học: Structural basis of p63a SAM domain mutants involved in AEC syndrome ppt

Báo cáo khoa học: Structural basis of p63a SAM domain mutants involved in AEC syndrome ppt

... the SAM domain family SAM domains, in general, were initially thought to be involved in protein–protein interactions by forming homo- or heterooligomers with other SAM domains or by interacting ... conserved cysteines (C558 and C561) in p63a SAM domain are also reduced as in the p73a SAM domain The inclusion of a reducing agent in the crystallization of p63a SAM domain would potentially have contributed ... observed in human p63a SAM domains that lead to AEC syndrome appear to cause destabilization of the domain Results and Discussion Domain boundary selection Attempts to crystallize the p63a SAM domain...
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Báo cáo khoa học: Natural and amyloid self-assembly of S100 proteins: structural basis of functional diversity doc

Báo cáo khoa học: Natural and amyloid self-assembly of S100 proteins: structural basis of functional diversity doc

... FEBS 4579 Natural and amyloid self-assembly of S100 proteins A Ca2+ G Fritz et al C E S100B HII HI S-100 EF-hand F S100A12 Ca2+ B D 90° HIV G HIII S100A8/A9 EF-hand Fig Structure of S100 proteins ... 20–33 for S100A8 and 23–36 for S100A9) and high affinity (amino acid residues 59–70 for S100A8 and 67–78 for S100A9) are A B 120 S100 EF-hand 80 40 Ly s H3 H4 S100A3 S100A6 S100A12 S100B 0 20 ... S100A4 [27] and S100P [28]; and S100A7 with S100A10 [29] Noncovalent multimers were observed for S100A12 [18], S100A8 ⁄ A9 [16,30], S100B [11], S100A4 [31] and a Zn2+-dependent tetramer for S100A2...
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Báo cáo khoa học: The structural basis of calpain behavior pptx

Báo cáo khoa học: The structural basis of calpain behavior pptx

... The structural basis of calpain behavior Y Benyamin two parts, DIIa and DIIb, come closer together, with concomitant release of constraints between the domains (large arrows) ... oscillations of [Ca2+], in particular those involving specific phosphorylations of calpastatin, calpains and targets The following Minireviews develop three themes on the role of calpain and in ... questions are raised by these molecular studies What is the correlation between the in vitro and in vivo Ca2+ requirements for calpain activity? How the two isoforms target their specific substrates...
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Báo cáo khoa học: Structural basis of charge transfer complex formation by riboflavin bound to 6,7-dimethyl-8-ribityllumazine synthase docx

Báo cáo khoa học: Structural basis of charge transfer complex formation by riboflavin bound to 6,7-dimethyl-8-ribityllumazine synthase docx

... Ó FEBS 2004 Structural basis of charge transfer formation (Eur J Biochem 271) 3209 Fig Inhibitors of 6,7-dimethyl-8-ribityllumazine synthase 5, 6-Carboxyethyl-7-oxo-8-ribityllumazine ... between the Cc-atom of H94 and the N7-atom of CEOL: wild-type enzyme: ˚ ˚ 6.5 A; W27Y mutant: 6.1 A) The smallest distance between the Cc-atom of H94 and the inhibitor plane (N5-atom of riboflavin) ... with stock solutions of the inhibitors to a final 10-fold molar excess of the corresponding inhibitor Crystals were grown at 18 °C by the sitting drop vapor diffusion method by mixing lL of the...
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Báo cáo toán học:

Báo cáo toán học: "The cluster basis of Z[x1,1, . . . , x3,3]" potx

.. . x 2,3 , x 3,2 , x 3,3 , ∆2 3,2 3 x 2,1 , x 2,2 , x 2,3 , ∆2 3,2 3 x 2,1 , x 2,3 , ∆2 3,2 3 , ∆2 3,1 3 x 2,3 , x 3,3 , ∆2 3,2 3 , ∆2 3,1 3 x 1,2 , x 2,2 , x 3,2 , ∆2 3,2 3 x 1,2 , x 3,2 , ∆2 3,2 3 , ∆1 3,2 3 x 3,2 , x 3,3 , ∆2 3,2 3 .. . x 2,1 , x 2,3 , ∆1 2,1 3 , ∆1 2,1 2 x 1,1 , x 2,1 , ∆1 2,1 3 , ∆1 2,1 2 x 1,2 , x 3,2 , ∆1 3,2 3 , ∆1 3,1 2 x 3,2 , x 3,3 , ∆1 3,2 3 , ∆1 3,1 2 x 1,1 , x 1,2 , ∆1 3,2 3 , ∆1 3,1 2 x 3,3 , ∆1 3,2 3 , ∆1 3,1 3 , ∆1 3,1 2 x 1,1 , ∆1 3,2 3 .. . ∆2 3,2 3 , ∆1 3,2 3 x 2,1 , x 2,3 , ∆2 3,1 3 , ∆1 2,1 3 x 1,1 , x 2,1 , ∆2 3,1 3 , ∆1 2,1 3 x 2,3 , x 3,3 , ∆2 3,1 3 , ∆1 2,1 3 x 1,1 , ∆2 3,1 3 , ∆1 3,1 3 , ∆1 2,1 3 x 3,3 , ∆2 3,1 3 , ∆1 3,1 3 , ∆1 2,1 3 x 1,2 , x 2,1 , x 2,2 , ∆2 3,2 3...
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Báo cáo y học:

Báo cáo y học: " Structural analysis of bacteriophage T4 DNA replication: a review in the Virology Journal series on bacteriophage T4 and its relatives" pptx

... Cite this article as: Mueser et al.: Structural analysis of bacteriophage T4 DNA replication: a review in the Virology Journal series on bacteriophage T4 and its relatives Virology Journal 2010 ... duplex DNA likely explains the sensitivity of T4 ligase activity to salt concentration Conclusion and Future Directions of Structural Analysis The bacteriophage T4 model system has been an invaluable ... ligase has a large central cleft, with the larger N-terminal adenylation domain containing the cofactor binding site and a Cterminal OB domain In contrast, the larger 671 residue E coli DNA ligase...
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ECOLOGICAL BASIS OF AGROFORESTRY - CHAPTER 1 pps

ECOLOGICAL BASIS OF AGROFORESTRY - CHAPTER 1 pps

... Batish et al. /Ecological Basis of Agroforestry 43277_C0 01 Final Proof page 11 12 .10 .2007 4 :19 pm Compositor Name: VBalamugundan Ecological Interactions in Agroforestry: An Overview 11 Need of rigorous ... for agroforestry? Agroforestry Systems 61: 51 63 Copyright 2008 by Taylor and Francis Group, LLC Batish et al. /Ecological Basis of Agroforestry 43277_C0 01 Final Proof page 14 14 12 .10 .2007 4 :19 pm ... Batish et al. /Ecological Basis of Agroforestry 43277_C0 01 Final Proof page 12 .10 .2007 4 :19 pm Compositor Name: VBalamugundan Ecological Basis of Agroforestry ecologically sustainable land-use option...
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The genetic basis of type 2 diabetes in a multi ethnic population in singapore

The genetic basis of type 2 diabetes in a multi ethnic population in singapore

... loci in the Chinese, Malay and Asian-Indians in Singapore Presented at the inaugural Asian Association for the Study of Diabetes in Osaka, Japan (20 09) TABLE OF CONTENTS 10 11 12 13 14 15 16 17 Acknowledgements ... Malay and Asian-Indian populations in Singapore We also examined their associations with traits that appear to be involved in the pathogenesis of type diabetes; namely obesity, insulin resistance ... be of interest to examine this in our multi- ethnic population 23 AIMS The overall objective of this thesis is to examine the genetic basis of type diabetes in the Chinese, Malay and Asian-Indian...
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Safety at Work 6 E Part 3 pptx

Safety at Work 6 E Part 3 pptx

... [19 76] All ER 65 26 Regina v Bevelectric [1992] 157 JP 32 3 140 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 Safety at Work ... system since they are dealt with under separate EU legislation 130 Safety at Work 1 .6. 3. 2 Product recall Article 6( h) of the General Product Safety Directive requires EU Member States to have ... false if false to a material degree, and anything likely to be taken as a statement covering the matters referred to above would be false if deemed to be a false statement of the relevant matter...
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