... a
3-A
˚
dissociation of subunits interacting by a1. The
base of dTTP is inserted between the a1-helix of two
subunits and is stacked between the rings of Phe18
and Phe34 from the adjacent subunit ... enzyme.
The pattern of interaction of ATP with TKs from
Gram-negative bacteria remains to be evaluated. O4 of
the thymine makes a hydrogen bond with the main-
chain nitrogen...
... of the WT enzyme
and between those of G194P and G198P.
Thermostability of WT and mutant enzymes
The thermostability of the WT and mutant enzymes
was determined by measuring residual activity after
incubation ... stability of
Ochr-MPH; however, replacing G198 of Ochr-MPH
with proline did not improve the thermostability.
The thermostability of the double point mutant
(G1...
... the
efficiency of a parser with a possible trade-off of los-
ing correct parses. For example, the noun phrase
reading of The dog barks is a correct parse, although
unlikely. By blocking the use of barks ... jh5
section of the treebank released with the ERG. This
text consists of edited written English in the domain
of Norwegian hiking instructions from the LOGON
project (Oepe...
... fraction of bound
32
P-labeled DNA
(R) is the ratio of the fraction of bound
32
P-labeled DNA in the presence of the
competitor DNA (cpm
bound
⁄ cpm
total
) to the
fraction of bound
32
P-labeled DNA ... efficiency of the reference unmodified DNA and the
competitor damaged DNA to the MTase. The K
d
values
were calculated by dividing K
r
d
(see below) by the experi-
me...
... half-life of % 13 and 33 min,
respectively.
Substrate specificity analysis
An analysis of the substrate specificity for DNA of the
enzymes shows that they both cleave plasmid DNA,
dsDNA and ssDNA as ... calculated as
described by Lonhienne et al. [37]. Activation energy, E
a
,
was extracted from the slope of the linear regression curve
obtained from an Arrhenius plot of 1 ⁄...
... exhibit a wide range of structural diversity produced by a
sequence of biosynthetic reactions. Cyclization of oxidosqualene is the ini-
tial origin of structural diversity of skeletons in their ... respectively, by GC-MS. Co-expression of CYP93E1
and b-amyrin synthase in S. cerevisiae yielded olean-12-ene-3b,24-diol. This
is the first identification of triterpene hydroxylase c...
... lm.
A
B
Fig. 5. Expression of iNOS in duodenum tissue of mice. (A) Quanti-
fication of iNOS mRNA induction by flagellin in whole tissue and
microdissected epithelium from villi assessed by real-time PCR. ... respectively. Specificity of PCR was checked by ana-
lyzing the melting curve. Relative mRNA levels were deter-
mined by comparing (a) the PCR cycle threshold between
cDNA...
... alignment of the C-terminal extension of PhKc. Sequences were obtained for both vertebrate and nonvertebrates by using
sequence from 296 to 386 of PhKc from rabbit muscle. Identities are shown by the ... 1.2 molar ratio of Ca
2+
⁄ CaM to PhK5
had been reached. The inset shows an expanded view of the indi-
cated area of the spectrum. (Bottom) An overlay of spectra from...
... half-maximal amounts of pPacUSp1 (50 ng, left panel) or increasing amount
of Ets-1 with 50 ng of either Sp1 or Sp3. (B) Assay of fgl2 promoter activity upon cotransfection of thresholds amount of both Sp1 ... site
of fgl2 mRNA. (A) 5¢-RACE of fgl2 mRNA
from macrophages. Stars indicate the 5¢-ter-
minus of 33 clones isolated after 5¢-RACE. (B)
Primer extension analysis of...